Basic Statistics
Measure | Value |
---|---|
Filename | P1234_1020_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 15843059 |
Sequences flagged as poor quality | 0 |
Sequence length | 123 |
%GC | 51 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
ATCCAAGTACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACGA | 55271 | 0.34886570832059643 | No Hit |
TACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACGAGATCGGG | 50352 | 0.31781741139763475 | No Hit |
TCTAGATAGTCAAGTTCGACCGTCTTCTCAGCGCTCCGCCAGGGCCGTGG | 35827 | 0.22613688429740747 | No Hit |
TCCTGCAATTCACATTAATTCTCGCAGCTAGCTGCGTTCTTCATCGACGC | 32265 | 0.20365385245362022 | No Hit |
CTGCAATTCACATTAATTCTCGCAGCTAGCTGCGTTCTTCATCGACGCAC | 29148 | 0.18397962161221518 | No Hit |
TGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAGGTCAGAAGGAT | 27072 | 0.17087609154267494 | No Hit |
CATCCAAGTACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACG | 23956 | 0.15120817261363478 | No Hit |
GTACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACGAGATCGG | 23296 | 0.14704231045279828 | No Hit |
ACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACGAGATCGGGC | 20807 | 0.13133196057655278 | No Hit |
GCCGCAAGTGCGTTCGAAGTGTCGATGATCAATGTGTCCTGCAATTCACA | 19960 | 0.1259857708034793 | No Hit |
GTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAGGTCAGAAGGA | 17666 | 0.11150624383839006 | No Hit |
CCATCCAAGTACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGAC | 16784 | 0.10593913713254491 | No Hit |
CTGTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAGGTCAGAAG | 16239 | 0.10249914489367236 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TGTACGA | 1120 | 0.0 | 59.57955 | 2 |
GTTATCG | 3150 | 0.0 | 55.357113 | 3 |
CGGAATT | 3100 | 0.0 | 54.539425 | 8 |
GTCGCAA | 1970 | 0.0 | 54.085064 | 1 |
TTATCGG | 3325 | 0.0 | 52.442745 | 4 |
GTCGGTA | 1090 | 0.0 | 50.486298 | 1 |
TCGTTAT | 3050 | 0.0 | 49.71324 | 1 |
TCGGAAT | 3675 | 0.0 | 46.483326 | 7 |
CGTTATC | 3455 | 0.0 | 46.42083 | 2 |
CCCGGTA | 4855 | 0.0 | 46.39215 | 9 |
ACCGTCC | 16755 | 0.0 | 45.56567 | 7 |
CACCGTC | 17000 | 0.0 | 45.39335 | 6 |
CCGTCCT | 17085 | 0.0 | 44.994022 | 8 |
GATAGTC | 16170 | 0.0 | 44.725395 | 5 |
TCGGTAT | 1320 | 0.0 | 44.344166 | 2 |
CGTCCTG | 17435 | 0.0 | 43.352448 | 9 |
GCGTACG | 2460 | 0.0 | 42.360107 | 1 |
ATCGATT | 3275 | 0.0 | 42.343117 | 5 |
TTATCGA | 3245 | 0.0 | 42.195763 | 3 |
TCGCAAG | 2505 | 0.0 | 42.06057 | 2 |