Basic Statistics
Measure | Value |
---|---|
Filename | P1234_1002_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 31080150 |
Sequences flagged as poor quality | 0 |
Sequence length | 123 |
%GC | 50 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
TCTAGATAGTCAAGTTCGACCGTCTTCTCAGCGCTCCGCCAGGGCCGTGG | 215943 | 0.6947939440446715 | No Hit |
TGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAGGTCAGAAGGAT | 103824 | 0.3340524418318444 | No Hit |
ACTTCCTCTAGATAGTCAAGTTCGACCGTCTTCTCAGCGCTCCGCCAGGG | 82010 | 0.2638661653820847 | No Hit |
TACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACGAGATCGGG | 81833 | 0.2632966700611162 | No Hit |
ATCCAAGTACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACGA | 65578 | 0.2109964076749951 | No Hit |
GTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAGGTCAGAAGGA | 63360 | 0.20386001998059852 | No Hit |
CTGTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAGGTCAGAAG | 58370 | 0.18780475641205077 | No Hit |
TGTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAGGTCAGAAGG | 53992 | 0.1737185953092247 | No Hit |
GTACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACGAGATCGG | 52824 | 0.16996056968837023 | No Hit |
GTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAGGTCAGAAGGATCG | 51968 | 0.16720640022651112 | No Hit |
CTTAGGACACCTGCGTTACCGTTTGACAGGTGTACCGCCCCAGTCAAACT | 51696 | 0.16633124357507928 | No Hit |
TACGACTTTTACTTCCTCTAGATAGTCAAGTTCGACCGTCTTCTCAGCGC | 46104 | 0.1483390524177007 | No Hit |
GCTTAAAACCCAAAAGGTCAGAAGGATCGTGAGGCCCCGCTTTCACGGTC | 45842 | 0.1474960706431597 | No Hit |
GGTTTGTTAGGTACTGTTTGCATTAATAAATTAAAGCTCCATAGGGTCTT | 43095 | 0.1386576319612357 | No Hit |
ACTAACCAGGCCCGACCCTGCTTAGCTTCCGAGATCAGACGAGATCGGGC | 37152 | 0.11953610262498734 | No Hit |
CTCTAGATAGTCAAGTTCGACCGTCTTCTCAGCGCTCCGCCAGGGCCGTG | 36948 | 0.11887973513641344 | No Hit |
GGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAGGTCAGAAGGATC | 36692 | 0.11805605828800697 | No Hit |
TAGTCAAGTTCGACCGTCTTCTCAGCGCTCCGCCAGGGCCGTGGGCCGAC | 32952 | 0.10602265433081887 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGATTAC | 7890 | 0.0 | 43.89669 | 7 |
TTATCGA | 8145 | 0.0 | 43.178238 | 3 |
GTTATCG | 4935 | 0.0 | 42.568542 | 3 |
CCGTTAA | 6715 | 0.0 | 41.848946 | 1 |
TAGGTAC | 13780 | 0.0 | 41.522255 | 8 |
TATCGAT | 8725 | 0.0 | 40.240738 | 4 |
GATAGTC | 83100 | 0.0 | 37.32704 | 5 |
TAGATAG | 82520 | 0.0 | 37.07301 | 3 |
AGATAGT | 84100 | 0.0 | 37.009575 | 4 |
TTTATCG | 9480 | 0.0 | 36.49242 | 2 |
CTAGATA | 77790 | 0.0 | 36.262413 | 2 |
CGTTATC | 5405 | 0.0 | 36.06385 | 2 |
TTATCGG | 5975 | 0.0 | 35.061073 | 4 |
TAGTCAA | 88605 | 0.0 | 34.90246 | 7 |
TGTCCGT | 19940 | 0.0 | 34.652584 | 6 |
GTTAGGT | 16335 | 0.0 | 34.599426 | 6 |
TCTAGAT | 80400 | 0.0 | 34.311405 | 1 |
CGACCTG | 14200 | 0.0 | 33.41364 | 8 |
ATCGATT | 10485 | 0.0 | 33.317528 | 5 |
CTGTCCG | 20815 | 0.0 | 33.31262 | 5 |