Basic Statistics
Measure | Value |
---|---|
Filename | P1234_1018_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 30833924 |
Sequences flagged as poor quality | 0 |
Sequence length | 123 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCGGAA | 439080 | 1.4240159637158085 | No Hit |
CGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGCAGC | 62948 | 0.20415176478997613 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTCTACG | 63730 | 0.0 | 112.20368 | 1 |
TCTACGG | 66195 | 0.0 | 107.60179 | 2 |
CTACGGC | 67075 | 0.0 | 105.86786 | 3 |
TACGGCC | 67035 | 0.0 | 105.00732 | 4 |
CGGCCAT | 68385 | 0.0 | 102.612465 | 6 |
ACGGCCA | 69945 | 0.0 | 100.5043 | 5 |
GCCATAC | 71750 | 0.0 | 97.03005 | 8 |
GGCCATA | 76690 | 0.0 | 91.8648 | 7 |
CCATACC | 75790 | 0.0 | 91.31066 | 9 |
TCACGAC | 6320 | 0.0 | 64.886475 | 4 |
GTTCACG | 6315 | 0.0 | 62.810253 | 2 |
TTCACGA | 6740 | 0.0 | 60.75643 | 3 |
CACGACG | 14065 | 0.0 | 56.23582 | 1 |
GTGCTCG | 3825 | 0.0 | 55.285503 | 1 |
ACGCCGT | 7060 | 0.0 | 53.004444 | 110-111 |
TCGCGTA | 5930 | 0.0 | 52.442905 | 108-109 |
CGCGTAT | 6120 | 0.0 | 52.235714 | 110-111 |
ATCGCGT | 6010 | 0.0 | 51.694977 | 108-109 |
TCGGACG | 9560 | 0.0 | 50.173775 | 106-107 |
ATGCGCG | 6595 | 0.0 | 49.808384 | 104-105 |