Basic Statistics
Measure | Value |
---|---|
Filename | P1234_1013_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 59012592 |
Sequences flagged as poor quality | 0 |
Sequence length | 123 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCGGAA | 1076684 | 1.824498744268003 | No Hit |
CGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGCAGC | 240557 | 0.40763672946275603 | No Hit |
GACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGCAGCT | 87053 | 0.14751597421784152 | No Hit |
GGAGCAGAAGGGCAAAAGCTCGCTTGATCTTGATTTTCAGTACGAATACA | 59541 | 0.10089541567670846 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTCTACG | 131450 | 0.0 | 111.75014 | 1 |
TCTACGG | 135915 | 0.0 | 107.82541 | 2 |
TACGGCC | 136745 | 0.0 | 106.448975 | 4 |
CTACGGC | 138055 | 0.0 | 106.09899 | 3 |
CGGCCAT | 139165 | 0.0 | 104.32295 | 6 |
ACGGCCA | 142335 | 0.0 | 102.02961 | 5 |
GCCATAC | 146160 | 0.0 | 98.67043 | 8 |
GGCCATA | 153945 | 0.0 | 94.45023 | 7 |
CCATACC | 153215 | 0.0 | 93.917336 | 9 |
TTAGCGG | 58200 | 0.0 | 55.24135 | 7 |
CTTAGCG | 59625 | 0.0 | 54.196022 | 6 |
CACGACG | 14655 | 0.0 | 53.81306 | 1 |
CGACTCT | 61265 | 0.0 | 53.48263 | 1 |
AGCGGTG | 60250 | 0.0 | 53.040073 | 9 |
TAGCGGT | 60680 | 0.0 | 52.885616 | 8 |
GAACGCG | 140990 | 0.0 | 51.985317 | 20-21 |
AACGCGC | 140850 | 0.0 | 50.386467 | 22-23 |
TCGCGTA | 5605 | 0.0 | 49.43346 | 108-109 |
CGCGTAT | 5745 | 0.0 | 49.115906 | 110-111 |
TCGGACG | 13510 | 0.0 | 48.799885 | 106-107 |