Basic Statistics
Measure | Value |
---|---|
Filename | P1234_1015_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 13216614 |
Sequences flagged as poor quality | 0 |
Sequence length | 123 |
%GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCGGAA | 106305 | 0.8043285519271427 | No Hit |
CGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGCAGC | 23606 | 0.1786085301424404 | No Hit |
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTC | 14213 | 0.1075388900666994 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTCTACG | 16050 | 0.0 | 109.33656 | 1 |
TCTACGG | 16785 | 0.0 | 104.30519 | 2 |
TACGGCC | 17190 | 0.0 | 101.16807 | 4 |
CTACGGC | 17310 | 0.0 | 100.90546 | 3 |
CGGCCAT | 17750 | 0.0 | 97.97073 | 6 |
ACGGCCA | 18420 | 0.0 | 94.34841 | 5 |
GCCATAC | 18880 | 0.0 | 91.35997 | 8 |
GGCCATA | 20445 | 0.0 | 85.14127 | 7 |
CCATACC | 20920 | 0.0 | 81.83681 | 9 |
TCACGAC | 2365 | 0.0 | 54.341557 | 4 |
CACGACG | 4965 | 0.0 | 53.769684 | 1 |
CGCGTAT | 2055 | 0.0 | 50.871223 | 110-111 |
TTCACGA | 2640 | 0.0 | 49.78736 | 3 |
AATCGCG | 2100 | 0.0 | 49.352154 | 106-107 |
ACGCCGT | 2560 | 0.0 | 48.675667 | 110-111 |
TCGCGTA | 2115 | 0.0 | 48.152576 | 108-109 |
ATCGCGT | 2160 | 0.0 | 47.565422 | 108-109 |
GTTCACG | 2715 | 0.0 | 47.551365 | 2 |
TCGGACG | 3590 | 0.0 | 47.3918 | 106-107 |
ATCCCGT | 5545 | 0.0 | 47.212917 | 108-109 |