Basic Statistics
Measure | Value |
---|---|
Filename | P1234_1001_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 33741075 |
Sequences flagged as poor quality | 0 |
Sequence length | 123 |
%GC | 50 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCGGAA | 498732 | 1.4781153238300795 | No Hit |
GGTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCACGGCCCT | 95333 | 0.2825428650391252 | No Hit |
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTC | 89200 | 0.26436620647089637 | No Hit |
CGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAACGCAGC | 88843 | 0.2633081488956709 | No Hit |
GTAGCCCCGGGAGGAACCCGGGGCCGCAAGTGCGTTCGAAGTGTCGATGA | 55156 | 0.16346841349897712 | No Hit |
GCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAG | 51790 | 0.1534924420754229 | No Hit |
GCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCA | 46473 | 0.13773420082199517 | No Hit |
GGATGGTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGTCGGCCCACGG | 41691 | 0.1235615640580509 | No Hit |
GGAGCAGAAGGGCAAAAGCTCGCTTGATCTTGATTTTCAGTACGAATACA | 38977 | 0.11551795548897005 | No Hit |
GGATGTGAGGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAG | 34894 | 0.10341697767483697 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTCTACG | 57900 | 0.0 | 108.418915 | 1 |
TCTACGG | 60690 | 0.0 | 103.35774 | 2 |
TACGGCC | 60890 | 0.0 | 102.77841 | 4 |
CTACGGC | 64415 | 0.0 | 97.48958 | 3 |
CGGCCAT | 65620 | 0.0 | 95.33761 | 6 |
ACGGCCA | 66600 | 0.0 | 94.00143 | 5 |
GCCATAC | 67225 | 0.0 | 92.553604 | 8 |
GGCCATA | 67880 | 0.0 | 92.34347 | 7 |
CCATACC | 69335 | 0.0 | 89.53483 | 9 |
CGACTCT | 19455 | 0.0 | 59.182343 | 1 |
TTAGCGG | 20710 | 0.0 | 54.576878 | 7 |
GCGCGGT | 12505 | 0.0 | 51.569912 | 6 |
CTTAGCG | 22720 | 0.0 | 49.92889 | 6 |
AACGCGC | 65925 | 0.0 | 46.945694 | 22-23 |
GAACGCG | 68515 | 0.0 | 46.47542 | 20-21 |
ACGCGCC | 70120 | 0.0 | 45.03261 | 22-23 |
GTAGCCC | 15525 | 0.0 | 45.002472 | 1 |
CATACCA | 70665 | 0.0 | 44.330032 | 10-11 |
TAGCCCC | 15645 | 0.0 | 44.2839 | 2 |
CACGACG | 9580 | 0.0 | 43.84299 | 1 |